The detailed information of tRNA gene sequence


Sequence ID>WENV170017321
Genome IDBART01014183
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 465
End posion on genome 381
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctaattttT
tRNA gene sequence 
GGAGGGCTAGTCCTAATGGTAAGGCAGCGGTCTTGAAAACCGCCGGGAGTAATCCCTTGG
GGGTTCGAGTCCCTCGCCCTCCGTta
Downstream region at tRNA end position 
ttaggaaaca
Secondary structure (Cloverleaf model)
>WENV170017321	Ser	TGA
                   T      GTta ttaggaaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    G         | + |                 T T
    G       A G G C
      T A          A     CGGGAGTAATCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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