The detailed information of tRNA gene sequence


Sequence ID>WENV170017323
Genome IDBART01014723
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 106
End posion on genome 190
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatttcgcgt
tRNA gene sequence 
GCAGCCGTCGCGTAGCCTGGTAGCGCGCTGGACTGCTAATCCAGTGGGGAAACCTGCGTG
GGTTCAAATCCCACCGGCTGCGCCA
Downstream region at tRNA end position 
aaactccaaa
Secondary structure (Cloverleaf model)
>WENV170017323	Ser	GCT
                   t      GCCA aaactccaaa
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        C      | | | | |     A
    C       T G C G       G T G G G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     TGGGGAAACCTGC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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