The detailed information of tRNA gene sequence


Sequence ID>WENV170017327
Genome IDBART01015174
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 845
End posion on genome 757
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattaatgtA
tRNA gene sequence 
GGAGAAATGGCTGAGTGGTCGAAAGCAATAGATTGCTAATCTATCGTACAATTTTTTGTA
CCCAGGGTTCGAATCCCTGTTTCTCCTTta
Downstream region at tRNA end position 
ttaatataat
Secondary structure (Cloverleaf model)
>WENV170017327	Ser	GCT
                   A      TTta ttaatataat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTACAATTTTTTGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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