The detailed information of tRNA gene sequence


Sequence ID>WENV170017328
Genome IDBART01015174
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 697
End posion on genome 622
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaaaagtttT
tRNA gene sequence 
GGGACTGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGACGTTGCGAGTTCGAG
TCTCGTCAGTCCCGTtt
Downstream region at tRNA end position 
aatattcata
Secondary structure (Cloverleaf model)
>WENV170017328	Asp	GTC
                   T      GTtt aatattcata
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     ACGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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