The detailed information of tRNA gene sequence


Sequence ID>WENV170017330
Genome IDBART01015861
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 114
End posion on genome 40
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
acgccctcta
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGTAGAGCACTACGTTGACATCGTAGGGGTCACAGGTTCGATCC
CTGTCGCGCCCACCA
Downstream region at tRNA end position 
tctgaacagg
Secondary structure (Cloverleaf model)
>WENV170017330	Val	GAC
                   a      ACCA tctgaacagg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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