The detailed information of tRNA gene sequence


Sequence ID>WENV170017332
Genome IDBART01016888
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 597
End posion on genome 523
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctatttttcg
tRNA gene sequence 
GGCAGCGTAGCTCAGCGGTAGAGCAGAGGACTCATAAGCCTTTGGTCGCTGGTTCAAACC
CAGCCGCTGCCACCA
Downstream region at tRNA end position 
ataaatacaa
Secondary structure (Cloverleaf model)
>WENV170017332	Met	CAT
                   g      ACCA ataaatacaa
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          C A
                    T     C G A C C     A
        G A        A      | | | | |     A
      C     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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