The detailed information of tRNA gene sequence


Sequence ID>WENV170017334
Genome IDBART01016917
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 788
End posion on genome 864
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataattaggt
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTAAGAGCACACGGTTCATACCCGTGGGGTCACTGGTTCAAA
TCCAGTCACCGCTACCA
Downstream region at tRNA end position 
aataagtgtt
Secondary structure (Cloverleaf model)
>WENV170017334	Met	CAT
                   t      ACCA aataagtgtt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A A        A     GGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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