The detailed information of tRNA gene sequence


Sequence ID>WENV170017336
Genome IDBART01017617
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 81
End posion on genome 156
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gaatgagtta
tRNA gene sequence 
GCCAGGGTGGCTGAGCGGTTGAGGCGGCCGGCTGCAGACCGGCTCTATACCGGTTCAAAT
CCGGTCCCTGGCTCCA
Downstream region at tRNA end position 
catgaccttt
Secondary structure (Cloverleaf model)
>WENV170017336	Cys	GCA
                   a      TCCA catgaccttt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
      C G A        G      | | | | |     A
    G       G T C G       A C C G G     C
    G         + | |                 T T
    T       A G G C
      T G          G     TCTAT
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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