The detailed information of tRNA gene sequence


Sequence ID>WENV170017337
Genome IDBART01017627
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 887
End posion on genome 810
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
acatactact
tRNA gene sequence 
GGTAGCGTAGCTCAATCTGGTTAGAGCAGTTGACTTATAATCGACAGGTTTAAGGTTCGA
ATCCTTACGTTACCACCA
Downstream region at tRNA end position 
taggcatgta
Secondary structure (Cloverleaf model)
>WENV170017337	Ile	TAT
                   t      ACCA taggcatgta
                     G - C
                     G - C
                     T - A
                     A - T
                     G + T
                     C - G
                     G - C          T A
                    T     A T T C C     A
    C T A A        A      | | | | |     G
  T         C T C G       T A A G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     AGGTT
                    G - C
                    T - A
                    T + G
                    G - C
                    A - T
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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