The detailed information of tRNA gene sequence


Sequence ID>WENV170017339
Genome IDBART01017627
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 727
End posion on genome 651
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
taccaatttt
tRNA gene sequence 
TCCAGGGTATCTCAATTTGGCAGAGAGGGTGACTGTTAATCACTTCGTTGGAGGTTCGAA
TCCTCCCCCTGGAGCCA
Downstream region at tRNA end position 
ttttatagtt
Secondary structure (Cloverleaf model)
>WENV170017339	Asn	GTT
                   t      GCCA ttttatagtt
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      T A A        A      | | | | |     G
    T       C T C T       G G A G G     C
    T       | | | |                 T T
    G       G A G A
      G C A        G     TCGTT
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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