The detailed information of tRNA gene sequence


Sequence ID>WENV170017343
Genome IDBART01018046
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 609
End posion on genome 533
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tttttttctc
tRNA gene sequence 
GGGCTCATAGCTCAGGTGGCTAGAGCGTACCCCTGATAAGGGTAAGGTCCCTGGTTCAAG
TCCAGGTGGGCCCACCA
Downstream region at tRNA end position 
tggggatgta
Secondary structure (Cloverleaf model)
>WENV170017343	Ile	GAT
                   c      ACCA tggggatgta
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T G
                    T     G G A C C     A
      G G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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