The detailed information of tRNA gene sequence


Sequence ID>WENV170017356
Genome IDBART01019278
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 618
End posion on genome 534
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tccacttcgg
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGCAGACGCGCTAGGTTCAGGACCTAGTGGGCATTAGCCCGTG
GAGGTTCGAGTCCTCTCTTCGGCACtg
Downstream region at tRNA end position 
gttgaagcgt
Secondary structure (Cloverleaf model)
>WENV170017356	Leu	CAG
                   g      ACtg gttgaagcgt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGCATTAGCCCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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