The detailed information of tRNA gene sequence


Sequence ID>WENV170017363
Genome IDBART01020527
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 762
End posion on genome 854
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtggattcgc
tRNA gene sequence 
GGAGAGATGGCCGAGTTGGCTGAAGGCGCTCGCCTGCTAAGTGAGTGTGGGGCGAAAGCT
CTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
agaaatttaa
Secondary structure (Cloverleaf model)
>WENV170017363	Ser	GCT
                   c      GCCA agaaatttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTGGGGCGAAAGCTCTACC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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