The detailed information of tRNA gene sequence


Sequence ID>WENV170017364
Genome IDBART01020855
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 74
End posion on genome 150
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agtataatgt
tRNA gene sequence 
GGGGACATAGCTCAGTTGGTTAGAGTGCCTGGATCACAACCAGGAGGTCTACGGTTCAAA
TCCGTATGTCCCCACCA
Downstream region at tRNA end position 
ctaacctact
Secondary structure (Cloverleaf model)
>WENV170017364	Val	CAC
                   t      ACCA ctaacctact
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     A T G C C     A
      T G A        A      | | | | |     A
    T       C T C G       T A C G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  A       A
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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