The detailed information of tRNA gene sequence


Sequence ID>WENV170017374
Genome IDBART01021680
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 105
End posion on genome 10
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tggctactgc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGGTCGACTCGAAATCGACTTGTCCGGTGAAGAG
CCGGGCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttcttgaagn
Secondary structure (Cloverleaf model)
>WENV170017374	Ser	CGA
                   c      GCCA ttcttgaagn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGTCCGGTGAAGAGCCGGGCAC
                    G - C
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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