The detailed information of tRNA gene sequence


Sequence ID>WENV170017380
Genome IDBART01022987
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 450
End posion on genome 522
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aatactttac
tRNA gene sequence 
GGGCCAGTGGTCTAGTGGTTATGACGTCGCGCTTACAACGCGGAGGTCGCCGGTTCAATT
CCGGCCTGGCCCAttt
Downstream region at tRNA end position 
taaaattttt
Secondary structure (Cloverleaf model)
>WENV170017380	Val	TAC
                   c      Attt taaaattttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C G G C C     A
      T G A        G      | | | | |     A
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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