The detailed information of tRNA gene sequence


Sequence ID>WENV170017387
Genome IDBART01023793
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 288
End posion on genome 362
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accagtaaat
tRNA gene sequence 
GGCCTGTTCGTCTAGTGGTTAGGACAGTAGGTTTTCAACCTACCAACAGGAGTTCAATTC
TCCTACAGGCTACCA
Downstream region at tRNA end position 
ttaaatgagg
Secondary structure (Cloverleaf model)
>WENV170017387	Glu	TTC
                   t      ACCA ttaaatgagg
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     T - A          T T
                    T     T C C T C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    G - C
                    T - A
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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