The detailed information of tRNA gene sequence


Sequence ID>WENV170017397
Genome IDBART01024464
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 473
End posion on genome 558
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagaataaaa
tRNA gene sequence 
GGAGAGGTGCTCCGAATGGTAAGGAACTGGCTTGGAAAGCCAGCGGGCATTTATGCCCTT
GCAGGTTCGAGTCCTGTCCTCTCCGCag
Downstream region at tRNA end position 
aatcataatt
Secondary structure (Cloverleaf model)
>WENV170017397	Ser	GGA
                   a      GCag aatcataatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     T G T C C     A
      A A G        G      + | | | |     G
    T       C C T C       G C A G G     C
    G         | +                   T T
    G       A G G A
      T A          A     CGGGCATTTATGCCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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