The detailed information of tRNA gene sequence


Sequence ID>WENV170017407
Genome IDBART01025986
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 322
End posion on genome 246
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttatttgtcT
tRNA gene sequence 
GGGTCCGTAGTGTAGCCTGGTTAACACGTCAGCTTGTCAAGCTGAAGATCGAGGGTTCAA
ATCCCTTCGGACCCGTtg
Downstream region at tRNA end position 
acaaaaatta
Secondary structure (Cloverleaf model)
>WENV170017407	Asp	GTC
                   T      GTtg acaaaaatta
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    C C G A        A      + | | | |     A
  T         T G T G       G A G G G     C
  G         | | | |                 T T
  G         A C A C
    T T A          G     AGATC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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