The detailed information of tRNA gene sequence


Sequence ID>WENV170017408
Genome IDBART01026119
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 139
End posion on genome 212
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gcctccaact
tRNA gene sequence 
GTGGCAGTAGCCTAAAGGTAAGGTCACTCGTTGTGAACGAGTCAATCGGAGTTCGATTCT
CCGCTGTCACCCCA
Downstream region at tRNA end position 
aaattgacta
Secondary structure (Cloverleaf model)
>WENV170017408	His	GTG
                   t      CCCA aaattgacta
                     G - C
                     T - A
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C          T T
                    T     G C C T C     A
        A A        A      | | | | |     G
      A     T C C G       C G G A G     C
      G     | | | +                 T T
      G     A G G T
        T A        C     CAAT
                    A - T
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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