The detailed information of tRNA gene sequence


Sequence ID>WENV170017413
Genome IDBART01026554
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 367
End posion on genome 289
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atttcctcgt
tRNA gene sequence 
CGGGATGTAGCGCAGCCTGGTTTAGCGCGCCTGCCTCGGGTGCAGGAGGTCGTGGGTTCA
AATCCCGCCATCCCGACCA
Downstream region at tRNA end position 
aaatgaagga
Secondary structure (Cloverleaf model)
>WENV170017413	Pro	CGG
                   t      ACCA aaatgaagga
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | + | | |     A
  T         C G C G       G T G G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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