The detailed information of tRNA gene sequence


Sequence ID>WENV170017418
Genome IDBART01027089
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 20
End posion on genome 114
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taatttagaa
tRNA gene sequence 
GGAGAGGTGGCTGAGCCCGGCTGAAAGCGCTCGACTCGAAATCGAGTAGGCGGGTAGTCC
CTGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaatcagtg
Secondary structure (Cloverleaf model)
>WENV170017418	Ser	CGA
                   a      GCCA aaaatcagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     G
  C         G T C G       G C G G G     C
  G           | | |                 T T
  G         A A G C
    C T G A        G     TAGGCGGGTAGTCCCTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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