The detailed information of tRNA gene sequence


Sequence ID>WENV170017419
Genome IDBART01027089
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 244
End posion on genome 337
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaaaataaa
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGATCGCCTGGAGAGCGATTGGGCGGCCATAAGC
TGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gttttaaaat
Secondary structure (Cloverleaf model)
>WENV170017419	Ser	GGA
                   a      GCCA gttttaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G C G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TGGGCGGCCATAAGCTGTCTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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