The detailed information of tRNA gene sequence


Sequence ID>WENV170017427
Genome IDBART01027314
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 698
End posion on genome 623
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gtgtaaatgt
tRNA gene sequence 
GGGGATATAGCTCAGTTGGGAGAGCGCTGCGTTCGCATCGCAGAGGTCGGGGGTTCGAAT
CCCCCTATCTCCACCA
Downstream region at tRNA end position 
gtatgcccct
Secondary structure (Cloverleaf model)
>WENV170017427	Ala	CGC
                   t      ACCA gtatgcccct
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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