The detailed information of tRNA gene sequence


Sequence ID>WENV170017429
Genome IDBART01027314
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 498
End posion on genome 422
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttgtggagt
tRNA gene sequence 
AGGAGTGTAGCTCAGTTGGCTAGAGCAACGGTCTCCAAAACCGTCGGTCGGGGGTTCGAG
TCCTCCCACTCCTGCCA
Downstream region at tRNA end position 
gattccagcc
Secondary structure (Cloverleaf model)
>WENV170017429	Trp	CCA
                   t      GCCA gattccagcc
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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