The detailed information of tRNA gene sequence


Sequence ID>WENV170017432
Genome IDBART01027314
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 239
End posion on genome 164
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gctccaaaga
tRNA gene sequence 
GGCGACGTAGCCAAGTGGTTAAGGCGGCGGTCTGCAAAACCGCTATTCACCGGTTCAAAT
CCGGTCGTCGCCTCCA
Downstream region at tRNA end position 
attttcctct
Secondary structure (Cloverleaf model)
>WENV170017432	Cys	GCA
                   a      TCCA attttcctct
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G G C C     A
      T G A        A      | | | | |     A
    G       A C C G       A C C G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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