The detailed information of tRNA gene sequence


Sequence ID>WENV170017443
Genome IDBART01029193
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 53
End posion on genome 126
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
atataattat
tRNA gene sequence 
GCCTCGGTAGCTCAGCTGGTTAGAGCGCGACATTGGTAATGTCGAGGTCCTGGGTTCGAC
CCCCAGCCGAGGCTttt
Downstream region at tRNA end position 
aaaactttaa
Secondary structure (Cloverleaf model)
>WENV170017443	Thr	GGT
                   t      Tttt aaaactttaa
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          C C
                    T     G A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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