The detailed information of tRNA gene sequence


Sequence ID>WENV170017451
Genome IDBART01029832
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 240
End posion on genome 165
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aaaatagttt
tRNA gene sequence 
GCCGGTGTAGCTCAATTGGTAGAGCAGCTGATTTGTAATCAGCAGGTTGTCCGTTCAAGT
CGGATCGCCGGCTCCA
Downstream region at tRNA end position 
gcgtggagga
Secondary structure (Cloverleaf model)
>WENV170017451	Thr	TGT
                   t      TCCA gcgtggagga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     T A G G C     A
      T A A        A      + | | | |     A
    T       C T C G       G T C C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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