The detailed information of tRNA gene sequence


Sequence ID>WENV170017453
Genome IDBART01030063
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 5
End posion on genome 83
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnntaat
tRNA gene sequence 
CGGGGTGTAGCGCAGTTTGGTTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGGAGGTTCA
AATCCTCTCACCCCGACCA
Downstream region at tRNA end position 
ggtttgtatc
Secondary structure (Cloverleaf model)
>WENV170017453	Pro	TGG
                   t      ACCA ggtttgtatc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    T T G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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