The detailed information of tRNA gene sequence


Sequence ID>WENV170017456
Genome IDBART01030221
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 686
End posion on genome 590
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
agtaaggcca
tRNA gene sequence 
GGGAGCGGATGAGTCCCGGTGGGCTTCGCGGACTTCAAATCCGTTGGGGGGCATAAGAAG
TGTCTTCGGTGGGTTCGACTCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
ctgttttgct
Secondary structure (Cloverleaf model)
>WENV170017456	SeC(p)	TCA
                   a      GCCA ctgttttgct
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | +                 T T
    T       G C T T
      G G          C     TGGGGGGCATAAGAAGTGTCTTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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