The detailed information of tRNA gene sequence


Sequence ID>WENV170017458
Genome IDBART01030469
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 207
End posion on genome 131
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cattctgcat
tRNA gene sequence 
GGGGTAGTAGCTCAGTGGCCTAGAGCAGTGGTCTCCAGAACCGAAGGTCGAAGGTTCAAG
TCCTTCCTATCCCACCA
Downstream region at tRNA end position 
tcatcgatag
Secondary structure (Cloverleaf model)
>WENV170017458	Trp	CCA
                   t      ACCA tcatcgatag
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T G A        A      | | | | |     A
    G       C T C G       G A A G G     C
    G       | | | |                 T T
    C       G A G C
      C T A        A     AGGTC
                    G   A
                    T + G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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