The detailed information of tRNA gene sequence


Sequence ID>WENV170017465
Genome IDBART01031427
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 123
End posion on genome 39
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atactatttT
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGACCGAAAGGTCCGT
GGGTTCGAATCCTACTCCCTCCGTat
Downstream region at tRNA end position 
tgaatataga
Secondary structure (Cloverleaf model)
>WENV170017465	Ser	TGA
                   T      GTat tgaatataga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGACCGAAAGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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