The detailed information of tRNA gene sequence


Sequence ID>WENV170017468
Genome IDBART01031582
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 452
End posion on genome 377
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
taatttaatc
tRNA gene sequence 
GCTGGCGTAGCTCAGCAGGTAGAGCAGGGCTCTTGTAAAGCTCAGGTCGGGGGTTCGATT
CCCTCCGCCAGCTCCA
Downstream region at tRNA end position 
gagccgcaga
Secondary structure (Cloverleaf model)
>WENV170017468	Thr	TGT
                   c      TCCA gagccgcaga
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
      C G A        A      | + | | |     G
    A       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    G + T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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