The detailed information of tRNA gene sequence


Sequence ID>WENV170017470
Genome IDBART01031582
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 197
End posion on genome 126
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ccgcaattct
tRNA gene sequence 
GCGAGAGTAGCACAGTGGTAGTGCAGTAGCCTTCCAAGCTACCTACGTGGGTTCGATCCC
CATCTCTCGCTCtt
Downstream region at tRNA end position 
attttccccc
Secondary structure (Cloverleaf model)
>WENV170017470	Gly	TCC
                   t      TCtt attttccccc
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          C T
                    T     T A C C C     A
        G A        A      + | | | |     G
      T     C A C G       G T G G G     C
      G     | | | |                 T T
      G     G T G C
        T A        A     CTAC
                    G - C
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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