The detailed information of tRNA gene sequence


Sequence ID>WENV170017471
Genome IDBART01031612
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 684
End posion on genome 609
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttggctaac
tRNA gene sequence 
GGGCCCATAGCTCAGCTGGCAGAGCAACCGGCTCATAACCGGTCGGTCCCTGGTTCGAAT
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
aaaaatagat
Secondary structure (Cloverleaf model)
>WENV170017471	Met	CAT
                   c      ACCA aaaaatagat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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