The detailed information of tRNA gene sequence


Sequence ID>WENV170017473
Genome IDBART01031615
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 425
End posion on genome 348
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tccatagtgt
tRNA gene sequence 
GCTCCTGTCGTCTAGCCTGGCCCAGGACACCGCCCTTTCACGGCGGCGACACGGGTTCAA
ATCCCGTCGGGAGCGCCA
Downstream region at tRNA end position 
tccaatttac
Secondary structure (Cloverleaf model)
>WENV170017473	Glu	TTC
                   t      GCCA tccaatttac
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C C A        A     CGAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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