The detailed information of tRNA gene sequence


Sequence ID>WENV170017484
Genome IDBART01032800
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 590
End posion on genome 665
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cgattgattg
tRNA gene sequence 
GCCGATGTAGCTCAACTGGTAGAGCAGCTCATTCGTAATGAGCAGGTTACCGGTTCAAGT
CCGGTCGTCGGCTCCA
Downstream region at tRNA end position 
gtgaaaggga
Secondary structure (Cloverleaf model)
>WENV170017484	Thr	CGT
                   g      TCCA gtgaaaggga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T + G
                     G - C          T G
                    T     T G G C C     A
      C A A        A      | | | | |     A
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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