The detailed information of tRNA gene sequence


Sequence ID>WENV170017499
Genome IDBART01034099
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 115
End posion on genome 200
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatggataag
tRNA gene sequence 
GCACGAATAACCAAATCAGGTACGGTACTACGTTGCTAGCGTAAGGTGGCAGAAATGCTG
TTCAGGTTCAAATCCTGATTCGTGCGtag
Downstream region at tRNA end position 
gtgatttaaa
Secondary structure (Cloverleaf model)
>WENV170017499	Ser	GCT
                   g      Gtag gtgatttaaa
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C
                     A - T
                     A - T          T A
                    T     A G T C C     A
      T A A        A      | | | | |     A
    C       A C C A       T C A G G     C
    A         | | |                 T T
    G       C G G T
      G T A        A     GGTGGCAGAAATGCTGT
                    C   A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       G
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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