The detailed information of tRNA gene sequence


Sequence ID>WENV170017503
Genome IDBART01034208
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 576
End posion on genome 485
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tataattttT
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTCAAGGCGTTCGCCTGCTAAGCGAATGAATGAGGAAACTT
GTTCCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
ttttaataaa
Secondary structure (Cloverleaf model)
>WENV170017503	Ser	GCT
                   T      GTtt ttttaataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T C A          G     TGAATGAGGAAACTTGTTCC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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