The detailed information of tRNA gene sequence


Sequence ID>WENV170017504
Genome IDBART01034277
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 408
End posion on genome 332
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taatatggta
tRNA gene sequence 
GGGGCTGTCGTTCAGCGGCCTAGGACACTGGCCTGTCACGCCAGAGATCGCGGGTTCGAA
TCCCGTCAGCCCCGCCA
Downstream region at tRNA end position 
tttaaatatt
Secondary structure (Cloverleaf model)
>WENV170017504	Asp	GTC
                   a      GCCA tttaaatatt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      C G A        C      + | | | |     G
    G       C T T G       G C G G G     C
    G       | + | |                 T T
    C       G G A C
      C T A        A     AGATC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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