The detailed information of tRNA gene sequence


Sequence ID>WENV170017507
Genome IDBART01034428
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 59
End posion on genome 135
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tttattctgt
tRNA gene sequence 
GGGGGTGTAGCTCAGTCCGGAAGAGCGCCTGCTTTGCACGCAGGAGGTCACCGGTTCGAA
TCCGGTCATCTCCACCA
Downstream region at tRNA end position 
tgtttttaac
Secondary structure (Cloverleaf model)
>WENV170017507	Ala	TGC
                   t      ACCA tgtttttaac
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T G G C C     A
      T G A        A      | | | | |     G
    C       C T C G       A C C G G     C
    C       | | | |                 T T
    G       G A G C
      G A A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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