The detailed information of tRNA gene sequence


Sequence ID>WENV170017508
Genome IDBART01034428
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 416
End posion on genome 492
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agtataatgt
tRNA gene sequence 
GGGGACATAGCTCAGTTGGTTAGAGTGCCTGGATCACAACCAGGAGGTCTACGGTTCAAA
TCCGTATGTCCCCACCA
Downstream region at tRNA end position 
ctaacctact
Secondary structure (Cloverleaf model)
>WENV170017508	Val	CAC
                   t      ACCA ctaacctact
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     A T G C C     A
      T G A        A      | | | | |     A
    T       C T C G       T A C G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  A       A
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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