The detailed information of tRNA gene sequence


Sequence ID>WENV170017515
Genome IDBART01035190
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 227
End posion on genome 151
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaggcagtat
tRNA gene sequence 
CGGGGTGTAGCGCAGCCAGGTAGCGCACCTGAATGGGGTTCAGGTGGTCGGAGGTTCAAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
tagatgtgag
Secondary structure (Cloverleaf model)
>WENV170017515	Pro	GGG
                   t      ACCA tagatgtgag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    A       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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