The detailed information of tRNA gene sequence


Sequence ID>WENV170017528
Genome IDBART01037051
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 483
End posion on genome 398
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCGAAGTGGCGGAATGGCAGACGCGCTACGTTCAGGGCGTAGTGTCCGTAAGGGCATGG
GAGTTCAAATCTCCCCTTCGGCACCA
Downstream region at tRNA end position 
tcattacttt
Secondary structure (Cloverleaf model)
>WENV170017528	Leu	CAG
                   n      ACCA tcattacttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C C C T C     A
      T A A        G      | | | | |     A
    G       G G C G       G G G A G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGTCCGTAAGGGCAT
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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