The detailed information of tRNA gene sequence


Sequence ID>WENV170017530
Genome IDBART01037051
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 304
End posion on genome 228
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgccactcgt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTTAGAGCACCTGCTTTACACGCAGGGGGTCAGAGGTTCAAG
TCCTCTATCGCCCACCA
Downstream region at tRNA end position 
tagcctcaat
Secondary structure (Cloverleaf model)
>WENV170017530	Val	TAC
                   t      ACCA tagcctcaat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A          T G
                    T     T C T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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