The detailed information of tRNA gene sequence


Sequence ID>WENV170017537
Genome IDBART01041203
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 103
End posion on genome 29
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctatttttcg
tRNA gene sequence 
GGCAGCGTAGCTCAGCGGTAGAGCAGAGGACTCATAAGCCTTTGGTCGCTGGTTCAAACC
CAGCCGCTGCCACCA
Downstream region at tRNA end position 
ataaatacaa
Secondary structure (Cloverleaf model)
>WENV170017537	Met	CAT
                   g      ACCA ataaatacaa
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          C A
                    T     C G A C C     A
        G A        A      | | | | |     A
      C     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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