The detailed information of tRNA gene sequence


Sequence ID>WENV170017552
Genome IDBARU01000606
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 263
End posion on genome 339
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
acaaaataaa
tRNA gene sequence 
GGTAGGATGGTCTAGCTTGGTAAGATTTTTGCTTCGGGAGTAAAGGATCCAGGGTTCAAA
TCCCTGTCCTGCCACCA
Downstream region at tRNA end position 
ttttctctgt
Secondary structure (Cloverleaf model)
>WENV170017552	Pro	CGG
                   a      ACCA ttttctctgt
                     G - C
                     G - C
                     T + G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     A
    T       T C T G       C A G G G     C
    T       | | | +                 T T
    G       A G A T
      G T A        T     GGATC
                    T - A
                    T - A
                    T - A
                    G + T
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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