The detailed information of tRNA gene sequence


Sequence ID>WENV170017557
Genome IDBARU01001044
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 555
End posion on genome 482
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttacgaaggT
tRNA gene sequence 
GGGTTCGTAGCTCAGTGGTAGAGCAGTCGGCTCATAACCGAAAGGTCGGAGGTTCGAACC
CTCCCGAGCCCATtg
Downstream region at tRNA end position 
gcaagcccca
Secondary structure (Cloverleaf model)
>WENV170017557	Met	CAT
                   T      ATtg gcaagcccca
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     C - G
                     G - C          C A
                    T     C C T C C     A
        G A        A      | | | | |     G
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    G   A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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