The detailed information of tRNA gene sequence


Sequence ID>WENV170017566
Genome IDBARU01001293
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 958
End posion on genome 867
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcaagtccat
tRNA gene sequence 
GGAGGGATCGCATAGTGGCCTAGTGCGGGCGCCTGCTAAGCGCTTACCCTGAGAAATCGG
GGTCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
ggtgaagtaa
Secondary structure (Cloverleaf model)
>WENV170017566	Ser	GCT
                   t      GCCA ggtgaagtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TACCCTGAGAAATCGGGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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