The detailed information of tRNA gene sequence


Sequence ID>WENV170017567
Genome IDBARU01001375
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 703
End posion on genome 793
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaagccctaa
tRNA gene sequence 
GGAGGGGTGTCCGAATTGGCAAGGAGCCGGTCTTGAAAACCGGTGAAAGGCAGCGATGCC
CGTCTGGGTTCGAGTCCCAGCCCCTCCGCCA
Downstream region at tRNA end position 
gtaatcatat
Secondary structure (Cloverleaf model)
>WENV170017567	Ser	TGA
                   a      GCCA gtaatcatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       C T G G G     C
    G         | | |                 T T
    G       A G G A
      C A          G     TGAAAGGCAGCGATGCCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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